News

Important modifications since 0.6.2 :

• Full MCQR (proteomics R package) integration for XIC and spectral count analysis on label free experiments
• Updated user manual
• Using PSI ProForma peptide sequence in peptide details view
• Full_C13N15 labeling method added

Complete changelog

The PAPPSO users’ scientific council will take place on September 26 and will be open to all, users of the facility or interested by its activities. This half-day of information and presentations will be available by video via the following link (https://orsay.bbb.cnrs.fr/b/lan-l7m-axe-ais)

This poster was presented at ProteoAIX 2023.

Using i2MassChroQ to merge identification results from X!Tandem and SpecOMS yields 20% more quantified proteins than MSfragger.

Focus Plateforme on PAPPSO

The Paris-Saclay University published a scoop.it article on PAPPSO. It is accessible here

Important modifications since 0.4.75 :

• Full Qt6 switch (graphical framework)
• MSstats integration : easy to use graphical user interface using R and MSstats in the background to provide protein abundances from a MassChroQ peptide quantification

Thanks to all contributors,