News

PAPPSO is taking part in the European project CHASSY (vidéo) to develop the use of yeasts to produce high value compounds for the cosmetic, nutrition, chemical and pharmaceutical sectors site web CHASSY, site INRA

Les journées du Protéome Vert 2019 se tiendront l’après-midi du lundi 3 et le matin du mardi 4 juin à AgroParisTech.

Here is the changelog since last announced 0.2.31 version :

• new feature to choose mass precision using “resolution”
• Fasta file export bug fixed

Display bug fix concerning the Windows version :

Here is the changelog since last announced 0.2.28 version :

• new FASTA exports options are available. This allows to export all valid and grouped proteins or only one protein per subgroup, or only one protein by group.
• in the spreadsheet report a new output dedicated to peptidomics is available. It displays the number of spectrum identified for each peptide in each sample to easily compare them.
• a new dialog box helps you to configure the quantification analysis using MassChroQ. It is now easy to choose all important parameters for XIC extraction, peak detection, alignment, as well as checking MS run file paths or choosing output files.
• A legend is displayed on XIC isotope areas to distinguish really measured areas and theoretical computed isotopic pattern.

X!TandemPipeline homepage

Since last announced 0.2.22 version, many features has been added :

• bug fix on the protein Evalue computation (the protein Evalue was too severe)
• automatic check for new version available online
• new feature to choose tabulated text or ODS for spreadsheet formats
• better windows integration (icons)
• more tests and controls to help user to configure the external program X!Tandem
• better Mascot dat parser
• graphical bug fix on the size of text (to avoid shrinking)

X!TandemPipeline homepage