Important modifications since 1.0.3 :

• Export file format for ProteoBench
• Windows setup now including X!Tandem executables
• Better GUI for statistical analysis using MCQR 0.6.14

Complete changelog

PROTÉOME VERT Days on June 10 and 11, 2024

Institut Agro, Montpellier

The Green Proteome Days are open to people interested in plant proteomics. You are invited to present new methodological developments in the fields of sample preparation, mass spectrometry and bioinformatics analysis as well as biological results obtained with proteomics. The conference is organized by the Green Proteome network.

Important modifications since 0.6.2 :

• Full MCQR (proteomics R package) integration for XIC and spectral count analysis on label free experiments
• Updated user manual
• Using PSI ProForma peptide sequence in peptide details view
• Full_C13N15 labeling method added

Complete changelog

The PAPPSO users’ scientific council will take place on September 26 and will be open to all, users of the facility or interested by its activities. This half-day of information and presentations will be available by video via the following link (https://orsay.bbb.cnrs.fr/b/lan-l7m-axe-ais)

This poster was presented at ProteoAIX 2023.

Using i2MassChroQ to merge identification results from X!Tandem and SpecOMS yields 20% more quantified proteins than MSfragger.