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PAPPSO

Plateforme d'Analyse Protéomique de Paris Sud-Ouest

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News

    • Jun 5, 2025
    • news

    Our R package MCQR is published!

    Our R package MCQR is published!

    MCQR is an R package R package for the in-depth exploration, processing, and analysis of quantitative proteomics data generated from either data-dependent or data-independent acquisition methods. It has been recently accepted for publication in Journal of Proteome research

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    • Mar 13, 2025
    • news

    PROTÉOME VERT days, the 26th and 27th of may 2025 at INRAE Dijon

    PROTÉOME VERT Days on May 26 and 27, 2025

    INRAE, 27 rue Sully, Dijon

    The Green Proteome Days are open to people interested in plant proteomics. You are invited to present new methodological developments in the fields of sample preparation, mass spectrometry and bioinformatics analysis as well as biological results obtained with proteomics. The conference is organized by the Green Proteome network.

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    • Dec 20, 2024
    • news

    i2MassChroQ results in ProteoBench

    i2MassChroQ results in ProteoBench

    ProteoBench is an open platform for benchmarking proteomics data analysis workflows.

    There several modules each one focusing on a specific Protomics technic:

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    • Oct 30, 2024
    • bioinfo

    i2MassChroQ version 1.0.18

    Important modifications since 1.0.10 :

    • Complete support for the Sage identification engine
    • Integrating a modified version of X!Tandem that can read directly mzML files and TimsTOF raw data
    • Switch from HTCondor to Slurm for HPC cluster support
    • Bunch of fix on reported issues
    • Support for ProteoBench metadata for Sage identifications
    • Numerous GUI improvements

    Complete changelog

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    • Sep 4, 2024
    • news

    PAPPSO users' scientific council will take place on September 23 2024

    The PAPPSO users’ scientific council will take place on September 23 and will be open to all, users of the facility or interested by its activities. It will be available by video via the following link (https://bbb.visio.inrae.fr/b/oli-nt9-82w-eav).

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Our R package MCQR is published! PROTÉOME VERT days, the 26th and 27th of may 2025 at INRAE Dijon i2MassChroQ results in ProteoBench
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