X!TandemPipeline supports now more identification engines. It suports now :

  • X!Tandem
  • mascot
  • Comet
  • Morpheus
  • MSGFplus

Identification engines specific scores, such as Mascot scores, peptide prophet probalities, MS-GF raw score, OMSSA E-value, Comet XCorr… are displayed (if needed).

The “pepxml” file format is supported now, so X!TandemPipeline can load results from the TPP and :

  • X!Tandem .xml files
  • Mascot .dat files
  • MzIdentML files
  • and now pepxml files

X!TandemPipeline homepage