MassChroQ : Mass Chromatogram Quantification software, performs quantification on data obtained from Liquid Chromatography-Mass Spectrometry (LC-MS) techniques. In particular if performs :

  • alignment of LC-MS/MS runs,
  • eXtracted Ion Chromatograms (XIC) extraction and various XIC filtering,
  • peak detection and peak matching,
  • quantification of several items of interest: all the identified peptides in the data, a given list of m/z values, a given list of m/z-rt values etc.