semiglobalalignment.cpp File Reference

protein to spectrum alignment More...

#include <QString>
#include <QStringRef>
#include "semiglobalalignment.h"
#include "types.h"
#include "../../amino_acid/aacode.h"
#include "../../protein/protein.h"
#include "correctiontree.h"

Go to the source code of this file.

Detailed Description

protein to spectrum alignment

Date

24/03/2025

Author

Aurélien Berthier

C++ implementation of the SpecPeptidOMS algorithm described in : (1) Benoist, É.; Jean, G.; Rogniaux, H.; Fertin, G.; Tessier, D. SpecPeptidOMS Directly and Rapidly Aligns Mass Spectra on Whole Proteomes and Identifies Peptides That Are Not Necessarily Tryptic: Implications for Peptidomics. J. Proteome Res. 2025. https://doi.org/10.1021/acs.jproteome.4c00870.

Definition in file semiglobalalignment.cpp.