libpappsomspp
Library for mass spectrometry
mzformatenumstr.cpp
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1/**
2 * \file pappsomspp/msfile/mzformatenumstr.cpp
3 * \date 12/2/2021
4 * \author Olivier Langella <olivier.langella@universite-paris-saclay.fr>
5 * \brief convert mzformat enumerations to strings
6 *
7 */
8
9/*******************************************************************************
10 * Copyright (c) 2021 Olivier Langella
11 *<olivier.langella@universite-paris-saclay.fr>.
12 *
13 * This file is part of the PAPPSOms++ library.
14 *
15 * PAPPSOms++ is free software: you can redistribute it and/or modify
16 * it under the terms of the GNU General Public License as published by
17 * the Free Software Foundation, either version 3 of the License, or
18 * (at your option) any later version.
19 *
20 * PAPPSOms++ is distributed in the hope that it will be useful,
21 * but WITHOUT ANY WARRANTY; without even the implied warranty of
22 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
23 * GNU General Public License for more details.
24 *
25 * You should have received a copy of the GNU General Public License
26 * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
27 *
28 ******************************************************************************/
29
30#include "mzformatenumstr.h"
31#include "../pappsoexception.h"
32#include <QObject>
33
34using namespace pappso;
35
36const QString
37pappso::MsDataFormatEnumStr::toString(pappso::MsDataFormat ms_data_format_enum)
38{
39
40 QString ms_data_format_str;
41 switch(ms_data_format_enum)
42 {
43 case MsDataFormat::abSciexT2D:
44 ms_data_format_str = "abSciexT2D";
45 break;
46 case MsDataFormat::abSciexWiff:
47 ms_data_format_str = "abSciexWiff";
48 break;
49 case MsDataFormat::agilentMassHunter:
50 ms_data_format_str = "agilentMassHunter";
51 break;
52 case MsDataFormat::brukerBaf:
53 ms_data_format_str = "brukerBaf";
54 break;
55 case MsDataFormat::brukerFid:
56 ms_data_format_str = "brukerFid";
57 break;
58 case MsDataFormat::brukerTims:
59 ms_data_format_str = "brukerTims";
60 break;
61 case MsDataFormat::brukerYep:
62 ms_data_format_str = "brukerYep";
63 break;
64 case MsDataFormat::MGF:
65 ms_data_format_str = "MGF";
66 break;
67 case MsDataFormat::msn:
68 ms_data_format_str = "msn";
69 break;
70 case MsDataFormat::mz5:
71 ms_data_format_str = "mz5";
72 break;
73 case MsDataFormat::mzML:
74 ms_data_format_str = "mzML";
75 break;
76 case MsDataFormat::mzXML:
77 ms_data_format_str = "mzXML";
78 break;
79 case MsDataFormat::SQLite3:
80 ms_data_format_str = "SQLite3";
81 break;
82 case MsDataFormat::thermoRaw:
83 ms_data_format_str = "thermoRaw";
84 break;
85 case MsDataFormat::watersRaw:
86 ms_data_format_str = "watersRaw";
87 break;
88 case MsDataFormat::xy:
89 ms_data_format_str = "xy";
90 break;
91 default:
92 throw pappso::PappsoException(
93 QObject::tr("MsDataFormat unknown :\n%1")
94 .arg((std::uint8_t)ms_data_format_enum));
95 }
96 return ms_data_format_str;
97}
pappso::MsDataFormatEnumStr::toString
static const QString toString(MsDataFormat mz_format_enum)
convert mz format enumeration to human readable string
Definition: mzformatenumstr.cpp:37
mzformatenumstr.h
convert mzformat enumerations to strings
pappso
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition: aa.cpp:39
pappso::MsDataFormat
MsDataFormat
Definition: types.h:131
pappso::MsDataFormat::xy
@ xy
(x,y) format
pappso::MsDataFormat::SQLite3
@ SQLite3
SQLite3 format.
pappso::MsDataFormat::MGF
@ MGF
Mascot format.