- m -

m : pappso::SavGolParams
m_aaCode : pappso::AaStringCodec, pappso::AaStringCodeMassMatching, pappso::cbor::psm::PsmSpecPeptidOms, pappso::specpeptidoms::SemiGlobalAlignment, pappso::specpeptidoms::SpOMSSpectrum
m_aaCodec : pappso::AaStringCodeMassMatching
m_aaCollection : pappso::AaCode
m_aaIonFactorBb : pappso::XtandemHyperscoreBis
m_aaIonFactorY : pappso::XtandemHyperscoreBis
m_aaLetter : pappso::AaBase
m_aaMassMap : pappso::AaBase
m_aaModificationList : pappso::PeptideFixedModificationBuilder, pappso::PeptideVariableModificationBuilder
m_aaNumberOfCarbonMap : pappso::AaBase
m_aaNumberOfHydrogenMap : pappso::AaBase
m_aaNumberOfNitrogenMap : pappso::AaBase
m_aaNumberOfOxygenMap : pappso::AaBase
m_aaNumberOfSulfurMap : pappso::AaBase
m_aapositions : pappso::specpeptidoms::SpOMSSpectrum
m_aaVec : pappso::Peptide
m_abundanceRatio : pappso::PeptideNaturalIsotopeAverage
m_accession : pappso::AaModification, pappso::FilterOboPsiModTermAccession, pappso::GrpProtein, pappso::OboPsiModTerm, pappso::Protein
m_acqDurationInMilliseconds : pappso::TimsFrameBase
m_alignedPeakPositionElementList : pappso::masschroq::Peptide
m_alignedRetentionTimeVector : pappso::MsRunRetentionTime< T >
m_allMs2Points : pappso::MsRunRetentionTime< T >
m_allObservedChargeStateList : pappso::masschroq::Peptide
m_aminoAcidCharList : pappso::AaBase
m_arbitrary_minimum_mz : pappso::FilterTandemDeisotope
m_arbitrary_range_between_isotopes : pappso::FilterTandemDeisotope
m_area : pappso::TracePeak
m_arrMasses : pappso::MzCalibrationModel1Cached
m_asciiTable : pappso::AaCode
m_atomCount : pappso::AaModification
m_averageMz : pappso::PeptideNaturalIsotopeAverage
m_axisLabelX : pappso::BasePlotWidget
m_axisLabelY : pappso::BasePlotWidget
m_base : pappso::AaStringCodec, pappso::AaStringCodeMassMatching
m_beginMassDelta : pappso::specglob::PeptideModel
m_best_alignment : pappso::specpeptidoms::Scenario, pappso::specpeptidoms::SemiGlobalAlignment
m_best_corrected_alignment : pappso::specpeptidoms::SemiGlobalAlignment
m_best_post_processed_alignment : pappso::specpeptidoms::SemiGlobalAlignment
m_BETTER_END_RA : pappso::specglob::SpectralAlignment
m_betterPeptideModel : pappso::specglob::PostTreatment
m_binaryData : pappso::TimsFrame
m_binningType : pappso::MzIntegrationParams
m_bins : pappso::MassSpectrumCombiner
m_binSizeDivisor : pappso::MzIntegrationParams
m_bucketMap : pappso::spectree::BucketClustering
m_bufferMaxSize : pappso::MsRunXicExtractorDiskBuffer
m_bufferScanSize : pappso::cbor::psm::PsmFileScanProcess
m_bufferSize : pappso::MsRunXicExtractorDiskBuffer
m_builtinMs2Centroid : pappso::TimsDdaPrecursors, pappso::TimsDiaSlices, pappso::TimsMsRunReaderMs2
m_cacheSize : pappso::TimsData
m_cartList : pappso::spectree::Bucket
m_cborInformations : pappso::cbor::psm::PsmFileReaderBase
m_cborLog : pappso::cbor::psm::PsmFileReaderBase
m_cborParameterMap : pappso::cbor::psm::PsmFileReaderBase
m_cborScanId : pappso::cbor::psm::PsmFileReaderBase
m_cborScanList : pappso::cbor::psm::PsmFileScanProcess
m_cborScanMs2 : pappso::cbor::psm::PsmFileReaderBase
m_cborScanPrecursor : pappso::cbor::psm::PsmFileReaderBase
m_cborScanPsmEval : pappso::cbor::psm::PsmFileReaderBase
m_charge : pappso::masschroq::PeptideMeasurementsBase::Measurement, pappso::masschroq::PeptideObservation::Observation
m_chargeMinimalFractionalPart : pappso::MassSpecTracePlotWidget
m_chargeStateEnvelopePeakSpan : pappso::MassSpecTracePlotWidget
m_checkMutations : pappso::cbor::psm::PsmSpecGlobScan, pappso::cbor::psm::PsmSpecPeptidOmsScan
m_children : pappso::MsRunDataSetTreeNode
m_cleavageCterMod : pappso::Peptide
m_cleavageNterMod : pappso::Peptide
m_clusters : pappso::FilterLowIntensitySignalRemoval
m_codeMassList : pappso::AaStringCodeMassMatching
m_colorMapPlotConfig : pappso::BaseColorMapPlotWidget
m_columnNumber : pappso::cbor::psm::SageTsvHandler
m_columnTypeList : pappso::cbor::psm::SageTsvHandler
m_complementary_peak_indexes : pappso::specpeptidoms::SpOMSSpectrum
m_consensusAlignedMs2RetentionTime : pappso::masschroq::Peptide
m_consensusAlignedPeakRetentionTime : pappso::masschroq::Peptide
m_consensusMs2RetentionTime : pappso::masschroq::MbrPeptideMeasurements
m_context : pappso::BasePlotWidget, pappso::MassSpecTracePlotWidget
m_conversionTime : pappso::TandemWrapperRun
m_convertMzDataUsingSpectrumIndex : pappso::TandemWrapperRun
m_count : pappso::GrpProtein, pappso::UiMonitorText
m_countMsLevelSpectrum : pappso::MsRunSimpleStatistics
m_countNote : pappso::XtandemPresetReader
m_countSharedPeaks : pappso::specglob::PeptideModel
m_CterMod : pappso::Peptide
m_cterModification : pappso::specglob::PeptideModel
m_cumulativeCterMasses : pappso::PeptideRawFragmentMasses
m_cumulativeNterMasses : pappso::PeptideRawFragmentMasses
m_curApex : pappso::FilterLowIntensitySignalRemoval
m_curIter : pappso::FilterLowIntensitySignalRemoval
m_currentDragPoint : pappso::BasePlotContext
m_currentIdentificationFileList : pappso::cbor::psm::PsmFileReaderBase
m_currentPeaklistFile : pappso::cbor::psm::PsmFileReaderBase
m_currentProtein : pappso::GrpGroupingMonitor
m_currentPsmProforma : pappso::cbor::psm::PsmFileReaderBase
m_currentPsmProteinRefList : pappso::cbor::psm::PsmFileReaderBase
m_currentSampleName : pappso::cbor::psm::PsmFileReaderBase
m_data : pappso::cbor::CborStreamReaderInterface, pappso::LinearRegression
m_dataKind : pappso::BasePlotContext
m_dataKindX : pappso::IntegrationScope, pappso::IntegrationScopeRhomb
m_dataKindY : pappso::IntegrationScopeRect, pappso::IntegrationScopeRhomb
m_decimalPlaces : pappso::MassDataCombinerInterface, pappso::MzIntegrationParams
m_decompressMemoryBufferSize : pappso::TimsBinDec
m_decoyFastaFiles : pappso::cbor::psm::PsmFileReaderBase
m_decoyTag : pappso::cbor::psm::SageFileReader, pappso::cbor::psm::SageReader::FastaSeq, pappso::cbor::psm::SageTsvHandler
m_definition : pappso::OboPsiModTerm
m_deisotope : pappso::cbor::psm::PsmSpecGlob, pappso::cbor::psm::PsmSpecPeptidOms
m_delta : pappso::MzRange
m_desc : pappso::BasePlotWidget
m_description : pappso::GrpProtein, pappso::masschroq::Protein, pappso::Protein
m_destinationMzXmlFileName : pappso::WrapTandemInput
m_destinationTandemInputFile : pappso::WrapTandemInput
m_destinationTandemInputFileName : pappso::WrapTandemInput
m_destinationTandemOutputFile : pappso::WrapTandemResults
m_destinationTandemOutputFileName : pappso::WrapTandemInput
m_detectionThresholdOnMaxMin : pappso::TraceDetectionZivy
m_detectionThresholdOnMinMax : pappso::TraceDetectionZivy
m_diffC12C13_z1 : pappso::FilterChargeDeconvolution, pappso::FilterRemoveC13
m_diffC12C13_z2 : pappso::FilterChargeDeconvolution, pappso::FilterRemoveC13
m_diffFormula : pappso::OboPsiModTerm
m_diffMono : pappso::OboPsiModTerm
m_digitizerDelay : pappso::MzCalibrationInterface
m_digitizerTimebase : pappso::MzCalibrationInterface
m_direction : pappso::PeptideFragment
m_dragDirections : pappso::BasePlotContext
m_dt : pappso::QualifiedMassSpectrum
m_dtDoubleNodeVectorMap : pappso::MsRunDataSetTree
m_dynamic : pappso::FilterRescaleY
m_evalKeyValueName : pappso::cbor::psm::PsmNewEval
m_evalName : pappso::cbor::psm::PsmNewEval
m_exclusionPrecision : pappso::FilterMzExclusion
m_expectedString : pappso::cbor::CborStreamReaderInterface
m_experimentalPrecursorMass : pappso::specglob::PeptideModel
m_factor : pappso::FilterScaleFactorY
m_fasta_file : pappso::FastaFileIndexer
m_fileFormat : pappso::MsFileAccessor, pappso::MsFileReader
m_fileName : pappso::BafAsciiMsRunReader, pappso::BasePlotWidget, pappso::MsFileAccessor, pappso::MsFileReader, pappso::MsRunId, pappso::XyMsRunReader
m_fileReaderType : pappso::MsFileAccessor
m_filter_floor : pappso::XtandemSpectrumProcess
m_filter_highpass : pappso::XtandemSpectrumProcess
m_filter_keep_greater : pappso::XtandemSpectrumProcess
m_filter_remove_c13 : pappso::XtandemSpectrumProcess
m_filter_rescale : pappso::XtandemSpectrumProcess
m_filterGreatestY : pappso::MassSpectrumFilterGreatestItensities
m_filterMax : pappso::FilterMorphoMaxMin, pappso::FilterMorphoMinMax
m_filterMin : pappso::FilterMorphoMaxMin, pappso::FilterMorphoMinMax
m_filterRange : pappso::MassSpectrumFilterResampleKeepMzRange, pappso::MassSpectrumFilterResampleRemoveMzRange
m_filterVector : pappso::FilterSuiteString
m_findExactPsiModLabel : pappso::OboPsiModTerm
m_findExternalLinks : pappso::OboTermForm
m_findRelatedPsiMsLabel : pappso::OboPsiModTerm
m_firstFrameId : pappso::TimsBinDec
m_firstGlobalMod : pappso::PeptideProFormaParser
m_firstParse : pappso::OboPsiModTerm
m_firstParseUnimod : pappso::OboPsiModTerm
m_fixedModificationList : pappso::PeptideBuilder
m_focusedBrush : pappso::BasePlotWidget
m_focusedColor : pappso::BasePlotWidget
m_formula : pappso::OboPsiModTerm
m_fragmentTolerance : pappso::cbor::psm::PsmFeatures, pappso::cbor::psm::PsmFeaturesScan, pappso::cbor::psm::PsmSpecGlob, pappso::cbor::psm::PsmSpecGlobScan, pappso::cbor::psm::PsmSpecPeptidOms, pappso::cbor::psm::PsmSpecPeptidOmsScan
m_frameCount : pappso::TimsData
m_frameId : pappso::FrameIdDescr, pappso::TimsFrameBase, pappso::TimsFrameRawDataChunck
m_frameId2GlobalSliceIndexBegin : pappso::TimsDiaSlices
m_frameIdDescrList : pappso::TimsData
m_frameLength : pappso::TimsFrameRawDataChunck
m_frameNumberOfScans : pappso::TimsFrameRawDataChunck
m_frameSliceRangeList : pappso::TimsDiaSlices
m_fullC13 : pappso::Peptide
m_fullH2 : pappso::Peptide
m_fullN15 : pappso::Peptide
m_generateDecoy : pappso::cbor::psm::SageFileReader
m_globalScanIndex : pappso::FrameIdDescr
m_greatestMz : pappso::FilterResampleKeepPointInPolygon, pappso::MzIntegrationParams
m_groupNumber : pappso::GrpGroup, pappso::GrpPeptide, pappso::GrpProtein, pappso::GrpSubGroup
m_grpGroupSpList : pappso::GrpExperiment
m_grpPeptideList : pappso::GrpExperiment
m_grpPeptidePtrList : pappso::GrpProtein
m_grpPostGroupingProteinListRemoval : pappso::GrpExperiment
m_grpPreGroupingProteinListRemoval : pappso::GrpExperiment
m_grpProteinList : pappso::GrpExperiment
m_grpProteinPtrList : pappso::GrpSubGroup
m_grpSubGroupPtrList : pappso::GrpSubGroupSet
m_halfWindowSize : pappso::FilterLocalMaximum, pappso::FilterMorphoAntiSpike, pappso::FilterMorphoWindowBase
m_handler : pappso::FastaReader, pappso::OboPsiMod, pappso::OboPsiMs, pappso::OboUnimod
m_hasScanNumbers : pappso::PwizMsRunReader
m_hasTimsTofMobilityIndex : pappso::masschroq::MsRun, pappso::masschroq::MsRunGroup
m_height : pappso::IntegrationScopeRect
m_id : pappso::masschroq::AlignmentMethod, pappso::masschroq::MsRunGroup, pappso::masschroq::Peptide, pappso::masschroq::Protein, pappso::masschroq::QuantificationMethod, pappso::spectree::ItemCart
m_indexArray : pappso::FastaFileIndexer
m_indexNodeMap : pappso::MsRunDataSetTree
m_instance : pappso::MsRunXicExtractorFactory
m_integrationScopeRhombHeight : pappso::BasePlotContext
m_integrationScopeRhombWidth : pappso::BasePlotContext
m_integrationScopeSpecs : pappso::FilterResampleKeepPointInPolygon
m_intensity : pappso::masschroq::Precursor
m_intensityExperimentalPeaks : pappso::specglob::PeptideModel
m_intensitySharedPeaks : pappso::specglob::PeptideModel
m_intercept : pappso::LinearRegression
m_interest_cells : pappso::specpeptidoms::SemiGlobalAlignment
m_ionCount : pappso::XtandemHyperscoreBis
m_ionDeltaMz : pappso::PeptideRawFragmentMasses
m_ionIsotopeRatioScore : pappso::IonIsotopeRatioScore
m_ionList : pappso::cbor::psm::PsmFeatures, pappso::cbor::psm::PsmFeaturesScan, pappso::PeptideFragmentIonListBase, pappso::PsmFeatures, pappso::XtandemHyperscoreBis
m_ionMobTraceList : pappso::TimsFrameMobilityTraces
m_ionType : pappso::PeptideFragmentIon
m_isA : pappso::OboPsiModTerm
m_isComplement : pappso::specself::SelfSpectrumDataPoint
m_isEmptyMassSpectrum : pappso::QualifiedMassSpectrum
m_isExcludeParent : pappso::XtandemSpectrumProcess
m_isExcludeParent_lower_dalton : pappso::XtandemSpectrumProcess
m_isExcludeParent_neutral_loss : pappso::XtandemSpectrumProcess
m_isExcludeParent_upper_dalton : pappso::XtandemSpectrumProcess
m_isFirstPass : pappso::cbor::psm::SageTsvHandler
m_isGroupingStarted : pappso::GrpExperiment
m_isInformations : pappso::cbor::psm::PsmFileAppend
m_isKeyBoardDragging : pappso::BasePlotContext
m_isLeftPseudoButtonKeyPressed : pappso::BasePlotContext
m_isMatchBetweenRun : pappso::masschroq::JsonInput
m_isMeasuringDistance : pappso::BasePlotContext
m_isMonoThread : pappso::MsRunReader, pappso::TimsDdaPrecursors
m_isMouseDragging : pappso::BasePlotContext
m_isotopeLevel : pappso::PeptideNaturalIsotopeAverage
m_isotopeMinimumRatio : pappso::masschroq::QuantificationMethod
m_isotopeRank : pappso::PeptideNaturalIsotopeAverage
m_isotopeVector : pappso::ChemicalFormula
m_isPeakListNeeded : pappso::MsRunReadConfig
m_isPeakShapeOutput : pappso::masschroq::CborOutputStream
m_isPotential : pappso::PeptideMethioninRemove
m_isProtCterMod : pappso::PeptideFixedModificationBuilder, pappso::PeptideVariableModificationBuilder
m_isProtElseMod : pappso::PeptideFixedModificationBuilder, pappso::PeptideVariableModificationBuilder
m_isProtNterMod : pappso::PeptideFixedModificationBuilder, pappso::PeptideVariableModificationBuilder
m_isReadAhead : pappso::MzxmlOutput, pappso::SpectrumCollectionHandlerInterface
m_isRefineSpectrumModel : pappso::XtandemSpectrumProcess
m_isRefineSpectrumSynthesis : pappso::XtandemHyperscoreBis
m_isRemoveIsotope : pappso::XtandemSpectrumProcess
m_isRemoveNonInformativeSubgroups : pappso::GrpExperiment
m_isRightPseudoButtonKeyPressed : pappso::BasePlotContext
m_isSpectrumIndex : pappso::masschroq::PeptideObservation::Observation
m_isStart : pappso::cbor::JsonStreamWriter
m_isTraceOutput : pappso::masschroq::CborOutputStream
m_isUnimod : pappso::OboPsiModTerm
m_isXicCoordOutput : pappso::masschroq::CborOutputStream
m_itemCartCount : pappso::spectree::BucketClustering
m_itemId : pappso::spectree::Bucket
m_itemList : pappso::spectree::ItemCart
m_itPosMax : pappso::specglob::SpectralAlignment
m_jsonAbsoluteFilePath : pappso::cbor::psm::SageReader
m_jsonData : pappso::cbor::psm::SageFileReader
m_jsonDocument : pappso::masschroq::JsonInput
m_keyboardModifiers : pappso::BasePlotContext
m_label : pappso::masschroq::PeptideLabel
m_labelMatch : pappso::FilterOboPsiModTermLabel
m_lastAxisRangeHistoryIndex : pappso::BasePlotWidget
m_lastCursorHoveredPoint : pappso::BasePlotContext
m_lastFrameId : pappso::TimsBinDec
m_lastMr : pappso::MassSpecTracePlotContext
m_lastMz : pappso::MassSpecTracePlotContext
m_lastPressedMouseButton : pappso::BasePlotContext
m_lastReleasedMouseButton : pappso::BasePlotContext
m_lastResolvingPower : pappso::MassSpecTracePlotContext
m_lastTicIntensity : pappso::MassSpecTracePlotContext
m_lastZ : pappso::MassSpecTracePlotContext
m_left : pappso::TracePeak
m_leftMousePseudoButtonKey : pappso::BasePlotWidget
m_length : pappso::Protein
m_line : pappso::cbor::psm::SageTsvHandler
m_linearAccessRawDataChunckDequeSize : pappso::TimsBinDec
m_linearAccessRawDataChunckList : pappso::TimsBinDec
m_linearForwardThreshold : pappso::TimsBinDec
m_lineNumber : pappso::cbor::psm::SageTsvHandler
m_listMod : pappso::Aa
m_location_saver : pappso::specpeptidoms::SemiGlobalAlignment
m_locations_heap : pappso::specpeptidoms::LocationSaver
m_lowestMz : pappso::FilterResampleKeepPointInPolygon
m_mapAccessionModifications : pappso::AaModification
m_mapCorrectionsStart : pappso::IonMobilityGrid
m_mapCorrectionsStop : pappso::IonMobilityGrid
m_mapDalton : pappso::PrecisionFactory
m_mapDiferrencesStart : pappso::IonMobilityGrid
m_mapDiferrencesStop : pappso::IonMobilityGrid
m_mapFilePath2MsRunSp : pappso::cbor::psm::SageFileReader
m_mapFilterParameters : pappso::ProjectParameters
m_mapFrame2WindowGroupPtr : pappso::TimsDiaSlices
m_mapFramesRecord : pappso::TimsData
m_mapGeneralParameters : pappso::ProjectParameters
m_mapGlobalMetadaTable : pappso::TimsData
m_mapIdentificationParameters : pappso::ProjectParameters
m_mapInstrumentParameters : pappso::ProjectParameters
m_mapIsotope : pappso::AaModification, pappso::PeptideNaturalIsotope
m_mapMzCalibrationRecord : pappso::TimsData
m_mapMzCalibrationSPtr : pappso::MzCalibrationStore
m_mapOboPsiModTerm : pappso::FilterOboPsiModMap
m_mapPeptides : pappso::GrpExperiment
m_mapPeptideToGroup : pappso::GrpMapPeptideToGroup
m_mapPeptideToSubGroupSet : pappso::GrpGroup, pappso::GrpMapPeptideToSubGroupSet
m_mapPpm : pappso::PrecisionFactory
m_mapProteins : pappso::GrpExperiment
m_mapQuantificationParameters : pappso::ProjectParameters
m_mapRes : pappso::PrecisionFactory
m_mapSimilarities : pappso::spectree::SpecXtractMap
m_mapTandemInputParameters : pappso::WrapTandemResults
m_mapTimsCalibrationRecord : pappso::TimsData
m_mapXicCoordRecord : pappso::TimsDdaPrecursors
m_mass : pappso::AaModification, pappso::GrpPeptide, pappso::PeptideFragment, pappso::PeptideFragmentIon, pappso::PeptideNaturalIsotope
m_massCollection : pappso::AaCode
m_massMono : pappso::OboPsiModTerm
m_massRange : pappso::FilterOboPsiModTermDiffMono
m_massSpectrumId : pappso::QualifiedMassSpectrum
m_matchBetweenRun : pappso::masschroq::QuantificationMethod
m_matchedMzDiffMean : pappso::PsmFeatures
m_matchedMzDiffMedian : pappso::PsmFeatures
m_matchedMzDiffSd : pappso::PsmFeatures
m_matrix : pappso::specglob::SpectralAlignment, pappso::specself::SelfSpectrum
m_max : pappso::FilterLowIntensitySignalRemoval, pappso::MzCalibrationModel1Cached, pappso::TracePeak
m_max_score : pappso::specpeptidoms::LocationSaver
m_maxMin : pappso::TraceDetectionZivy
m_maxMz : pappso::MsRunXicExtractorDisk
m_maxMzRange : pappso::FilterTriangle
m_maxNumberMod : pappso::PeptideVariableModificationBuilder
m_maxPeptideVariantListSize : pappso::Enzyme
m_maxScore : pappso::specglob::SpectralAlignment
m_maxSize : pappso::PeptideSizeFilter
m_maxTandemRunTimeMs : pappso::TandemWrapperRun
m_maxX : pappso::FilterResampleKeepXRange, pappso::FilterResampleRemoveXRange, pappso::SelectionPolygon
m_maxY : pappso::SelectionPolygon
m_mbrPeptideMeasurementsList : pappso::masschroq::MsRunPeptideList
m_measurementList : pappso::masschroq::PeptideMeasurementsBase
m_memoryBufferSize : pappso::TimsFrameRawDataChunck
m_message : pappso::PappsoException
m_min : pappso::FilterLowIntensitySignalRemoval
m_min_score : pappso::specpeptidoms::LocationSaver
m_minimumMz : pappso::cbor::psm::PsmFeatures, pappso::cbor::psm::PsmSpecGlob, pappso::cbor::psm::PsmSpecPeptidOms
m_minIntPointCount : pappso::FilterLowIntensitySignalRemoval
m_minIntStdDevFactor : pappso::FilterLowIntensitySignalRemoval
m_minMax : pappso::TraceDetectionZivy
m_minMean : pappso::FilterLowIntensitySignalRemoval
m_minMz : pappso::MsRunXicExtractorDisk
m_minNumberMod : pappso::PeptideVariableModificationBuilder
m_minSize : pappso::PeptideSizeFilter
m_minStdDev : pappso::FilterLowIntensitySignalRemoval
m_minX : pappso::FilterResampleKeepXRange, pappso::FilterResampleRemoveXRange, pappso::SelectionPolygon
m_minY : pappso::SelectionPolygon
m_miscleavage : pappso::Enzyme
m_mmap_scan2index : pappso::MsRunReaderScanNumberMultiMap
m_modificationCount : pappso::PeptideVariableModificationBuilder
m_mods : pappso::masschroq::Peptide
m_monitor : pappso::MzxmlOutput
m_mouseButtonsAtMousePress : pappso::BasePlotContext
m_mouseButtonsAtMouseRelease : pappso::BasePlotContext
m_mouseMoveHandlerSkipAmount : pappso::BasePlotWidget
m_mouseMoveHandlerSkipCount : pappso::BasePlotWidget
m_ms1frameIdList : pappso::TimsDiaSlices
m_ms1IsMasked : pappso::MzxmlOutput
m_ms1MeanFilter : pappso::MsRunRetentionTime< T >
m_ms1RetentionTimeVector : pappso::MsRunRetentionTime< T >
m_ms1SmoothingWindow : pappso::masschroq::AlignmentMethod
m_ms2frameId2Ms1FrameId : pappso::TimsDiaSlices
m_ms2MeanFilter : pappso::MsRunRetentionTime< T >
m_ms2MedianFilter : pappso::MsRunRetentionTime< T >
m_ms2precision : pappso::PsmFeatures
m_ms2precisionUnit : pappso::XtandemPresetReader
m_ms2precisionValue : pappso::XtandemPresetReader
m_ms2SmoothingWindow : pappso::masschroq::AlignmentMethod
m_ms2TendencyWindow : pappso::masschroq::AlignmentMethod
m_msDataPtrVector : pappso::PwizMsFileReader
m_msfileList : pappso::masschroq::JsonInput
m_msLevel : pappso::QualifiedMassSpectrum
m_msLevels : pappso::MsRunReadConfig
m_msMsType : pappso::TimsFrameBase
m_msMsWindowGroupList : pappso::TimsDiaSlices
m_msrun_points : pappso::MsRunXicExtractor, pappso::MsRunXicExtractor::MsRunXicExtractorReadPoints
m_msRunGroupSpList : pappso::masschroq::JsonInput
m_msRunId : pappso::QualifiedXic
m_msRunPeptideListSpList : pappso::masschroq::MsRunGroup
m_msRunSliceListCache : pappso::MsRunXicExtractorDisk
m_msRunXicCoordChargeList : pappso::masschroq::Peptide
m_mutex : pappso::AaModification, pappso::masschroq::PeptideBase, pappso::MsRunXicExtractorDisk, pappso::PwizMsRunReader, pappso::TimsData, pappso::TimsDdaPrecursors
m_mz : pappso::masschroq::Precursor, pappso::MzRange, pappso::QualifiedXic
m_mzCalibrationArr : pappso::MzCalibrationInterface
m_mzFormat : pappso::MsRunId, pappso::TandemWrapperRun
m_mzTarget : pappso::OboListProxyModel
m_n_most_intense : pappso::XtandemSpectrumProcess
m_name : pappso::AaModification, pappso::BasePlotWidget, pappso::OboPsiModTerm
m_nameMatch : pappso::FilterOboPsiModTermName
m_nativeId : pappso::MassSpectrumId
m_needPeakListByMsLevel : pappso::SpectrumCollectionHandlerInterface
m_neutralLossMass : pappso::XtandemSpectrumProcess
m_neutralLossWindowDalton : pappso::XtandemSpectrumProcess
m_neutralPhosphoLossNumber : pappso::PeptideFragmentIon
m_newEvalParameters : pappso::cbor::psm::PsmNewEval
m_newYMax : pappso::FilterNormalizeIntensities
m_nextIsValue : pappso::cbor::JsonStreamWriter
m_niMinAbundance : pappso::masschroq::PeptideBase
m_nMostIntense : pappso::cbor::psm::PsmSpecGlob, pappso::cbor::psm::PsmSpecPeptidOms
m_nodeList : pappso::spectree::SpecTree
m_noiseLevel : pappso::FilterLowIntensitySignalRemoval
m_noiseMean : pappso::FilterLowIntensitySignalRemoval
m_noiseStdDev : pappso::FilterLowIntensitySignalRemoval
m_nominal : pappso::PrecisionBase
m_NterMod : pappso::Peptide
m_nterModification : pappso::specglob::PeptideModel
m_numberOfPoints : pappso::FilterGreatestY, pappso::FilterGreatestYperWindow
m_oboPsiModTerm : pappso::OboTermForm
m_oboPsiModTermList : pappso::FilterOboPsiModSink, pappso::OboListModel
m_oboPsiModTermNativeIDFormat : pappso::MsFileAccessor
m_observationList : pappso::masschroq::PeptideObservation
m_observedInMsRunSpList : pappso::masschroq::Peptide
m_ofastastream : pappso::FastaOutputStream
m_oldIndex : pappso::PrecisionWidget
m_operation : pappso::cbor::psm::PsmFileScanProcessAndCopy
m_origin : pappso::AaModification, pappso::OboPsiModTerm
m_origin_matrix : pappso::specpeptidoms::Scenario
m_originalMsDataFileName : pappso::WrapTandemResults
m_originalPeptideModel : pappso::specglob::PostTreatment
m_originMzDataFileName : pappso::WrapTandemInput
m_originTandemOutpuFileName : pappso::WrapTandemInput
m_originTandemPresetFileName : pappso::WrapTandemInput
m_outputDecoyFastaFiles : pappso::cbor::psm::PsmFileAppend
m_outputParameterMap : pappso::cbor::psm::PsmFileAppend
m_outputStream : pappso::UiMonitorText
m_outputTargetFastaFiles : pappso::cbor::psm::PsmFileAppend
m_params : pappso::FilterSavitzkyGolay
m_paramsMap : pappso::MsRunReadConfig, pappso::QualifiedMassSpectrum
m_parentCharge : pappso::PsmFeatures
m_parseDefinition : pappso::OboPsiModTerm
m_passY : pappso::FilterHighPass, pappso::FilterLowPass
m_pattern : pappso::PeptideModificatorBase
m_peakIonPairs : pappso::PsmFeatures
m_peakQualityCategory : pappso::masschroq::PeptideMeasurementsBase::Measurement
m_peakShapeMarginInSeconds : pappso::masschroq::CborOutputStream
m_pen : pappso::BasePlotWidget
m_pepModificatorPtrList : pappso::PeptideModificatorPipeline
m_peptide : pappso::PeptideNaturalIsotope
m_peptideCodedFragments : pappso::ProteinIntegerCode
m_peptideLabelMap : pappso::masschroq::Peptide
m_peptideMap : pappso::masschroq::JsonInput
m_peptideMeasurementsList : pappso::masschroq::MsRunPeptideList
m_peptideModPtrList : pappso::PeptideModificatorTee
m_peptideNaturalIsotopeAverageSp : pappso::masschroq::PeptideMeasurementsBase::Measurement
m_peptideNaturalIsotopeAverageSpListByCharge : pappso::masschroq::PeptideBase
m_peptideNaturalIsotopeSpList : pappso::PeptideNaturalIsotopeAverage
m_peptideObservationList : pappso::masschroq::MsRunPeptideList
m_peptidePtrList : pappso::GrpPeptideSet, pappso::GrpSubGroup
m_peptideSet : pappso::GrpGroup
m_peptideStore : pappso::masschroq::JsonInput
m_percentage : pappso::FilterCeilingAmplitudePercentage, pappso::FilterFloorAmplitudePercentage
m_phosphorylationNumber : pappso::PeptideFragmentIonListBase
m_point : pappso::IntegrationScope
m_points : pappso::IntegrationScopeRhomb, pappso::SelectionPolygon
m_preAllocatedFastMapPerThread : pappso::TimsDataFastMap
m_precision : pappso::AaStringCodeMassMatching, pappso::specglob::PostTreatment
m_precision_ptr : pappso::specpeptidoms::SemiGlobalAlignment, pappso::specpeptidoms::SpOMSSpectrum
m_precisionPtr : pappso::FilterComplementIonEnhancer, pappso::FilterRemoveC13, pappso::OboListProxyModel, pappso::specglob::ExperimentalSpectrum, pappso::specglob::SpectralAlignment
m_precisionPtrZ1 : pappso::FilterChargeDeconvolution
m_precisionPtrZ2 : pappso::FilterChargeDeconvolution
m_precursor_mass_error : pappso::specpeptidoms::SpOMSSpectrum
m_precursorIonData : pappso::QualifiedMassSpectrum
m_precursorMass : pappso::specglob::ExperimentalSpectrum
m_precursorMassDelta : pappso::specglob::SpectralAlignment
m_precursorNativeId : pappso::QualifiedMassSpectrum
m_precursorSpectrumIndex : pappso::QualifiedMassSpectrum
m_precursorTheoreticalMass : pappso::PsmFeatures
m_precursorTheoreticalMz : pappso::PsmFeatures
m_preferredFileReaderTypeMap : pappso::MsFileAccessor
m_presenceAbsenceMatrix : pappso::ProteinPresenceAbsenceMatrix
m_pressedKeyCode : pappso::BasePlotContext
m_pressedMouseButtons : pappso::BasePlotContext
m_prevApex : pappso::FilterLowIntensitySignalRemoval
m_prevIter : pappso::FilterLowIntensitySignalRemoval
m_progressIndex : pappso::cbor::psm::SageTsvHandler
m_projectParameters : pappso::masschroq::JsonInput
m_proteinList : pappso::cbor::psm::SageTsvHandler
m_proteinMap : pappso::cbor::psm::PsmFileReaderBase, pappso::cbor::psm::PsmProteinMap, pappso::masschroq::JsonInput
m_proteinSpList : pappso::masschroq::Peptide
m_protoHyperscore : pappso::XtandemHyperscoreBis
m_proxyMass : pappso::Peptide
m_psiModLabel : pappso::OboPsiModTerm
m_psiMsLabel : pappso::OboPsiModTerm
m_psmEvalValues : pappso::cbor::psm::PsmNewEval
m_psmFeatures : pappso::cbor::psm::PsmFeaturesScan
m_PsmFileScanProcess : pappso::cbor::psm::CborScanMapBase
m_psmProteinMap : pappso::cbor::psm::SageReader, pappso::cbor::psm::SageTsvHandler
m_qualifiedMassSpectrum : pappso::specglob::ExperimentalSpectrum, pappso::specpeptidoms::SpOMSSpectrum
m_qualifiedSpectrumList : pappso::MsRunQualifiedSpectrumLoader
m_quantile : pappso::FilterQuantileBasedRemoveY
m_qxmlStreamReader : pappso::XmlStreamReaderInterface
m_randemAccessFrameRawDataChunck : pappso::TimsBinDec
m_rank : pappso::GrpPeptide, pappso::GrpProtein
m_ratio : pappso::PeptideNaturalIsotope
m_ratioPassY : pappso::FilterHighPassPercentage
m_recognitionSite : pappso::Enzyme
m_referenceMs2ObservationList : pappso::masschroq::Peptide
m_reindexed_peaks : pappso::specpeptidoms::SpOMSSpectrum
m_releasedKeyCode : pappso::BasePlotContext
m_remainingGrpProteinList : pappso::GrpExperiment
m_removeTranslationStopRegExp : pappso::Protein
m_removeZeroValDataPoints : pappso::MzIntegrationParams
m_retention_time_list : pappso::MsRunReaderRetentionTimeLine
m_retentionTimeAroundTarget : pappso::MsRunXicExtractorInterface
m_retentionTimeEndSeconds : pappso::MsRunReadConfig
m_retentionTimeLine : pappso::masschroq::MsRun
m_retentionTimeList : pappso::MsRunXicExtractorDisk
m_retentionTimeReferenceMethod : pappso::MsRunRetentionTime< T >
m_retentionTimeStartSeconds : pappso::MsRunReadConfig
m_right : pappso::TracePeak
m_rightMousePseudoButtonKey : pappso::BasePlotWidget
m_rootNodes : pappso::MsRunDataSetTree
m_rt : pappso::QualifiedMassSpectrum
m_rtDoubleNodeVectorMap : pappso::MsRunDataSetTree
m_rtInSeconds : pappso::TimsFrameBase
m_rtSize : pappso::MsRunXicExtractorDisk
m_runId : pappso::MsRunId
m_sageFileReader : pappso::cbor::psm::SageReader
m_sageJsonFile : pappso::cbor::psm::SageFileReader
m_sageReader : pappso::cbor::psm::SageTsvHandler
m_sageVersion : pappso::cbor::psm::SageFileReader
m_sampleMap : pappso::cbor::psm::SageTsvHandler
m_sampleName : pappso::MsRunId
m_sampleStorageList : pappso::cbor::psm::PsmFileAppend
m_scanCount : pappso::FrameIdDescr, pappso::TimsFrameBase
m_scanIndexList : pappso::TimsFrameMobilityTraces
m_scanNumber : pappso::masschroq::PeptideObservation::Observation
m_scanNumber2PrecursorMap : pappso::masschroq::PrecursorParser
m_scanOffsetList : pappso::TimsFrameType1
m_scanSizeList : pappso::TimsFrameType1
m_scenario : pappso::specpeptidoms::SemiGlobalAlignment
m_scoreTable : pappso::specglob::ScoreValues, pappso::specpeptidoms::ScoreValues
m_scoreValues : pappso::specglob::SpectralAlignment
m_scorevalues : pappso::specpeptidoms::SemiGlobalAlignment
m_seamarks : pappso::MsRunRetentionTime< T >
m_seen_upward_phase : pappso::FilterLowIntensitySignalRemoval
m_selectionPolygon : pappso::BasePlotContext
m_seqAaCode : pappso::ProteinIntegerCode
m_sequence : pappso::GrpPeptide, pappso::Protein
m_shouldTracersBeVisible : pappso::BasePlotWidget
m_sink : pappso::FilterOboPsiModTermAccession, pappso::FilterOboPsiModTermDiffMono, pappso::FilterOboPsiModTermLabel, pappso::FilterOboPsiModTermName, pappso::PeptideBuilder, pappso::PeptideFixedModificationBuilder, pappso::PeptideMethioninRemove, pappso::PeptideModificatorPipeline, pappso::PeptideSemiEnzyme, pappso::PeptideSizeFilter, pappso::PeptideVariableModificationBuilder
m_size : pappso::PeptideFragment
m_sliceBufferMap : pappso::MsRunXicExtractorDiskBuffer
m_sliceNumber : pappso::MsRunSlice
m_slope : pappso::LinearRegression
m_smallestMz : pappso::MzIntegrationParams
m_smooth : pappso::TraceDetectionZivy
m_someoneIsLoadingFrameId : pappso::TimsData
m_specglobParameters : pappso::cbor::psm::PsmSpecGlob
m_specpeptidomsParameters : pappso::cbor::psm::PsmSpecPeptidOms
m_spectrumCount : pappso::BafAsciiMsRunReader, pappso::MsRunDataSetTree
m_spectrumFirstNodeIndex : pappso::spectree::SpecTree
m_spectrumIndex : pappso::cbor::psm::SageTsvHandler, pappso::masschroq::Precursor, pappso::MassSpectrumId
m_spectrumIndex2precursorMap : pappso::masschroq::MsRun
m_spectrumIndex2PrecursorMap : pappso::masschroq::PrecursorParser
m_spectrumList : pappso::MsRunSlice
m_spectrumNativeId : pappso::cbor::psm::SageTsvHandler
m_spectrumSumIntensity : pappso::PsmFeatures
m_startDragPoint : pappso::BasePlotContext
m_staticModificationList : pappso::cbor::psm::SageTsvHandler
m_stdMessage : pappso::PappsoException
m_subGroupList : pappso::GrpGroup
m_subGroupNumber : pappso::GrpProtein, pappso::GrpSubGroup
m_supported_peaks : pappso::specpeptidoms::SpOMSSpectrum
m_switchButtonValue : pappso::SwitchWidget
m_takeOnlyFirstWildcard : pappso::Enzyme
m_tandemBinary : pappso::TandemWrapperRun
m_tandemSpectrumProcess : pappso::cbor::psm::PsmFeatures, pappso::cbor::psm::PsmFeaturesScan
m_tandemVersion : pappso::TandemWrapperRun
m_targetFastaFile : pappso::cbor::psm::SageFileReader
m_targetFastaFiles : pappso::cbor::psm::PsmFileReaderBase
m_targetMzSum : pappso::FilterComplementIonEnhancer, pappso::specglob::ExperimentalSpectrum
m_temporaryDirectory : pappso::MsRunXicExtractorDisk
m_term : pappso::OboPsiMod, pappso::OboPsiMs, pappso::OboUnimod
m_theoreticalPeakList : pappso::specglob::PeptideModel
m_thousandIndexToFrameIdDescrListIndex : pappso::TimsData
m_threads : pappso::XtandemPresetReader
m_threshold : pappso::FilterLowIntensitySignalRemoval
m_ticChromMapTrace : pappso::MsRunReaderTicChromatogram
m_ticStart : pappso::TraceDetectionMoulon
m_ticStop : pappso::TraceDetectionMoulon
m_timsBinFile : pappso::TimsBinDec
m_timsC6 : pappso::TimsFrameBase
m_timsC7 : pappso::TimsFrameBase
m_timsCompressionType : pappso::TimsBinDec
m_timsDataDirectory : pappso::TimsData
m_timsDvStart : pappso::TimsFrameBase
m_timsFrameBaseCache : pappso::TimsData
m_timsFrameCache : pappso::TimsData
m_timsNdelay : pappso::TimsFrameBase
m_timsSlope : pappso::TimsFrameBase
m_timsTtrans : pappso::TimsFrameBase
m_timsVmax : pappso::TimsFrameBase
m_timsVmin : pappso::TimsFrameBase
m_tmpDir : pappso::TandemWrapperRun
m_tmpDirName : pappso::masschroq::JsonInput, pappso::MsRunXicExtractorFactory
m_tofIndexList : pappso::TimsFrameMobilityTraces
m_totalMatchedIons : pappso::XtandemHyperscoreBis
m_totalNumberPeptide : pappso::GrpGroupingMonitor
m_totalNumberProtein : pappso::GrpGroupingMonitor
m_totalPrecursorCount : pappso::TimsDdaPrecursors
m_totalScanCount : pappso::TimsData
m_totalSlicesCount : pappso::TimsDiaSlices
m_totalSteps : pappso::UiMonitorInterface
m_trace : pappso::specself::SelfSpectrum
m_tracePeakSp : pappso::masschroq::PeptideMeasurementsBase::Measurement
m_tree_in_heap : pappso::specpeptidoms::LocationSaver
m_tree_scores : pappso::specpeptidoms::LocationSaver
m_triangleSlope : pappso::FilterTriangle
m_type : pappso::MsRunXicExtractorFactory
m_uiMonitor : pappso::masschroq::JsonInput
m_unfocusedBrush : pappso::BasePlotWidget
m_unfocusedColor : pappso::BasePlotWidget
m_unit : pappso::UiMonitorTextPercent
m_units : pappso::AaStringCodec
m_updated_cells : pappso::specpeptidoms::SemiGlobalAlignment
m_value : pappso::FilterResampleKeepGreater, pappso::FilterResampleKeepSmaller
m_valuesCorrected : pappso::MsRunRetentionTime< T >
m_valueToRemove : pappso::FilterRemoveY
m_variableModificationList : pappso::cbor::psm::SageTsvHandler
m_wasClickOnXAxis : pappso::BasePlotContext
m_wasClickOnYAxis : pappso::BasePlotContext
m_wasMouseDragging : pappso::BasePlotContext
m_wassKeyBoardDragging : pappso::BasePlotContext
m_width : pappso::IntegrationScope
m_wildCardB : pappso::Enzyme
m_wildCardX : pappso::Enzyme
m_wildCardZ : pappso::Enzyme
m_writerXmlTandemInput : pappso::WrapTandemInput
m_writerXmlTandemOutput : pappso::WrapTandemResults
m_x : pappso::FilterSavitzkyGolay
m_xAxisRangeHistory : pappso::BasePlotWidget
m_xDelta : pappso::BasePlotContext
m_xicExtractionRetentionTimeAroundTarget : pappso::masschroq::QuantificationMethod
m_xicExtractMethod : pappso::masschroq::QuantificationMethod, pappso::MsRunXicExtractorInterface
m_xicFilterSmoothing : pappso::TraceDetectionMoulon
m_xicFilterSuite : pappso::masschroq::QuantificationMethod
m_xmlId : pappso::MsRunId
m_xmlPrefix : pappso::MsFileAccessor
m_xRange : pappso::BasePlotContext
m_xRegionRangeEnd : pappso::BasePlotContext
m_xRegionRangeStart : pappso::BasePlotContext
m_xtProcess : pappso::TandemWrapperRun
m_xWindowRange : pappso::FilterGreatestYperWindow
m_yAxisRangeHistory : pappso::BasePlotWidget
m_yDelta : pappso::BasePlotContext
m_yf : pappso::FilterSavitzkyGolay
m_yr : pappso::FilterSavitzkyGolay
m_yRange : pappso::BasePlotContext
m_yRegionRangeEnd : pappso::BasePlotContext
m_yRegionRangeStart : pappso::BasePlotContext
m_z : pappso::PeptideNaturalIsotopeAverage, pappso::XicPeptideInterface
map_id_count : pappso::spectree::SpecTree::MapSimilarityCount
mapTofIndexIntensity : pappso::TimsDataFastMap
mass : pappso::CodeToMass
mass_difference : pappso::specglob::AminoAcidModel, pappso::specglob::SpectralAlignmentDataPoint
massDelta : pappso::specself::SelfSpectrumDataPoint
matched_intensity_pct : pappso::cbor::psm::SageTsvHandler::Line
matched_peaks : pappso::cbor::psm::SageTsvHandler::Line
maxKeyValue : pappso::ColorMapPlotConfig
maxMzValue : pappso::ColorMapPlotConfig
mcsp_experimentalSpectrum : pappso::specglob::SpectralAlignment
mcsp_massSpectrum : pappso::MsRunDataSetTreeNode
mcsp_ms1Filter : pappso::TimsDdaPrecursors
mcsp_ms2Filter : pappso::TimsDdaPrecursors
mcsp_msRunId : pappso::MassSpectrumId, pappso::MsRunDataSetTree, pappso::MsRunReader
mcsp_peakList : pappso::specglob::PeptideModel
mcsp_peptideSp : pappso::PeptideNaturalIsotopeAverage
mcsp_peptideSpectrum : pappso::specglob::SpectralAlignment
mcsp_postExtractionTraceFilter : pappso::MsRunXicExtractorInterface
mcsp_selectedMsRunId : pappso::MsFileAccessor
mcsp_timsFrameCstSPtr : pappso::TimsFrameMobilityTraces
mcsp_traceDetectionInterfaceCstSPtr : pappso::masschroq::QuantificationMethod
min_score : pappso::specpeptidoms::SemiGlobalAlignment
minKeyValue : pappso::ColorMapPlotConfig
minMzValue : pappso::ColorMapPlotConfig
missed_cleavages : pappso::cbor::psm::SageTsvHandler::Line
mobilityIndexBegin : pappso::TimsFrame::XicComputeStructure
mobilityIndexEnd : pappso::TimsFrame::XicComputeStructure
modification : pappso::cbor::psm::SageReader::SageModification
mp_binSizeModel : pappso::MzIntegrationParams
mp_cborOutput : pappso::cbor::psm::PsmFileScanProcessAndCopy
mp_cborWriter : pappso::cbor::psm::SageFileReader, pappso::cbor::psm::SageReader
mp_currentSample : pappso::cbor::psm::SageTsvHandler
mp_daltonValueSpinBox : pappso::PrecisionWidget
mp_fileLinear : pappso::TimsBinDec
mp_fileRandom : pappso::TimsBinDec
mp_firstModificator : pappso::PeptideModificatorPipeline
mp_hPosTracerItem : pappso::BasePlotWidget
mp_jsonOutput : pappso::cbor::psm::PsmCbor2Json
mp_lastPeptideSinkInterface : pappso::PeptideModificatorPipeline
mp_mcqlPeptide : pappso::masschroq::PeptideLabel
mp_mod : pappso::PeptideFixedModificationBuilder, pappso::PeptideVariableModificationBuilder
mp_modAfter : pappso::PeptideVariableModificationReplacement
mp_monitor : pappso::cbor::psm::SageReader, pappso::cbor::psm::SageTsvHandler, pappso::GrpExperiment, pappso::TandemWrapperRun
mp_output : pappso::cbor::psm::PsmFileAppend, pappso::MzxmlOutput::Translater
mp_outStream : pappso::GrpGroupingMonitor
mp_parent : pappso::MsRunDataSetTreeNode, pappso::OboListModel::OboPsiModHandler
mp_peak_bars_precursor : pappso::QCPSpectrum
mp_peptideLabel : pappso::masschroq::PeptideMeasurementsBase::Measurement
mp_peptideModificatorTee : pappso::PeptideModificatorPipeline
mp_ppmValueSpinBox : pappso::PrecisionWidget
mp_precision : pappso::CosineSimilarity, pappso::PeptideNaturalIsotopeAverage, pappso::QualifiedXic, pappso::XtandemHyperscoreBis
mp_precisionDalton : pappso::PrecisionWidget
mp_precisionPpm : pappso::PrecisionWidget
mp_precisionRes : pappso::PrecisionWidget
mp_psmSpecGlob : pappso::cbor::psm::PsmSpecGlobScan
mp_psmSpecPeptidOms : pappso::cbor::psm::PsmSpecPeptidOmsScan
mp_referenceMsRunRetentionTime : pappso::masschroq::Peptide
mp_resValueSpinBox : pappso::PrecisionWidget
mp_selectionRectangeLine1 : pappso::BasePlotWidget
mp_selectionRectangeLine2 : pappso::BasePlotWidget
mp_selectionRectangeLine3 : pappso::BasePlotWidget
mp_selectionRectangeLine4 : pappso::BasePlotWidget
mp_self : pappso::cbor::psm::SageReader::FastaSeq
mp_sourceModel : pappso::OboListProxyModel
mp_timsData : pappso::TimsXicExtractorInterface
mp_timsDataOrigin : pappso::TimsDdaPrecursors, pappso::TimsDiaSlices
mp_timsDdaPrecursors : pappso::TimsMsRunReaderMs2
mp_timsDiaSlices : pappso::TimsMsRunReaderDia
mp_unitComboBox : pappso::PrecisionWidget
mp_vEndTracerItem : pappso::BasePlotWidget
mp_vPosTracerItem : pappso::BasePlotWidget
mp_vStartTracerItem : pappso::BasePlotWidget
mp_xDeltaTextItem : pappso::BasePlotWidget
mp_xicExtractionLowerPrecisionPtr : pappso::masschroq::QuantificationMethod
mp_xicExtractionUppersPrecisionPtr : pappso::masschroq::QuantificationMethod
mp_yDeltaTextItem : pappso::BasePlotWidget
mpa_cborReader : pappso::cbor::CborStreamReaderInterface
mpa_decompressMemoryBuffer : pappso::TimsBinDec
mpa_filterMorphoMedian : pappso::FilterMorphoBackground
mpa_filterMorphoMinMax : pappso::FilterMorphoBackground
mpa_memoryBuffer : pappso::TimsFrameRawDataChunck
mpa_multiMapScanNumber : pappso::MsRunReader
mpa_mzCalibrationStore : pappso::TimsData
mpa_oboListModel : pappso::OboListWidget
mpa_oboListProxyModel : pappso::OboListWidget
mpa_origColorMapData : pappso::BaseColorMapPlotWidget
mpa_origColorMapPlotConfig : pappso::BaseColorMapPlotWidget
mpa_outputStream : pappso::MgfOutput, pappso::MzxmlOutput
mpa_peptideNaturalIsotopeList : pappso::masschroq::PeptideBase
mpa_precursorParser : pappso::masschroq::MsRun
mpa_psmFeatures : pappso::cbor::psm::PsmFeatures
mpa_sequenceTxtIn : pappso::FastaFileIndexer
mpa_temporaryDirectory : pappso::cbor::psm::PsmFileAppend, pappso::MsRunXicExtractorDisk, pappso::TandemWrapperRun
mpa_timsBinDec : pappso::TimsData
mpa_timsData : pappso::TimsMsRunReaderMs2Selected
mpa_timsDdaPrecursors : pappso::TimsData
mpa_timsDiaSlices : pappso::TimsData
mpa_writer : pappso::masschroq::CborOutputStream
ms1_index : pappso::TimsDdaPrecursors::SpectrumDescr
ms2_index : pappso::TimsDdaPrecursors::SpectrumDescr
ms2_intensity : pappso::cbor::psm::SageTsvHandler::Line
msLevel : pappso::MassSpectrumLineData
msms_type : pappso::TimsFrameRecord
msp_alignmentMethod : pappso::masschroq::JsonInput, pappso::masschroq::MsRunGroup
msp_filterExclusion : pappso::CosineSimilarity
msp_filterKeepGreater : pappso::PsmFeatures
msp_fragment : pappso::PeptideFragmentIon
msp_integrationScope : pappso::BasePlotContext
msp_ionMobilityGrid : pappso::masschroq::JsonInput, pappso::masschroq::MsRunGroup
msp_left : pappso::specpeptidoms::CorrectionTree
msp_massSpectrum : pappso::QualifiedMassSpectrum
msp_ms1Filter : pappso::TimsMsRunReaderMs2
msp_ms2Filter : pappso::TimsMsRunReaderMs2
msp_ms2FilterSuiteString : pappso::TandemWrapperRun
msp_msData : pappso::PwizMsRunReader
msp_msRun : pappso::masschroq::MsRunPeptideList
msp_msrun_reader : pappso::MsRunXicExtractorInterface
msp_msRunPeptideListAlignmentReference : pappso::masschroq::MsRunGroup
msp_msRunReader : pappso::masschroq::MsRun
msp_msrunReader : pappso::masschroq::PrecursorParser
msp_msRunRetentionTime : pappso::masschroq::MsRunPeptideList
msp_msRunXicExtractorInterfaceSp : pappso::masschroq::MsRun
msp_mzCalibration : pappso::TimsFrameBase
msp_naturalIsotopeAverage : pappso::XicPeptideFragmentIonNaturalIsotope
msp_peptide : pappso::cbor::psm::SageTsvHandler, pappso::masschroq::MbrPeptideMeasurements, pappso::masschroq::PeptideBase, pappso::masschroq::PeptideObservation, pappso::PeptideFragment, pappso::PeptideFragmentIonListBase, pappso::PeptideNaturalIsotopeList, pappso::PsmFeatures, pappso::specglob::PeptideSpectrum
msp_peptide_fragment_ion_list : pappso::PeptideFragmentIonListBase
msp_peptide_natural_isotope_list : pappso::PeptideNaturalIsotopeList
msp_peptideFragmentIon : pappso::XicPeptideFragmentIon, pappso::XicPeptideFragmentIonNaturalIsotope
msp_peptideInterface : pappso::XicPeptideInterface
msp_peptideObservation : pappso::masschroq::PeptideMeasurements
msp_peptideSpectrumMatch : pappso::PsmFeatures
msp_precursor : pappso::masschroq::PeptideObservation::Observation
msp_protein : pappso::ProteinIntegerCode
msp_quantificationMethod : pappso::masschroq::JsonInput
msp_right : pappso::specpeptidoms::CorrectionTree
msp_timsData : pappso::TimsMsRunReaderBase, pappso::TimsMsRunReaderMs2
msp_xic : pappso::QualifiedXic
msp_xicCoord : pappso::masschroq::PeptideMeasurementsBase::Measurement, pappso::masschroq::Precursor
msrun_p : pappso::masschroq::Peptide::MsRunXicCoordCharge
MsRunXicExtractorFactory : pappso::MsRunXicExtractor, pappso::MsRunXicExtractorDisk, pappso::MsRunXicExtractorDiskBuffer
mz : pappso::AaStringCodeMassMatching::aaCodeAndMassRange, pappso::PrecursorIonData, pappso::specglob::PeptideSpectrumDataPoint
mz_calibration_id : pappso::TimsFrameRecord
mz_range : pappso::MassSpectrumLineData, pappso::specglob::TheoreticalPeakDataPoint
mz_range_low : pappso::AaStringCodeMassMatching::aaCodeAndMassRange
mz_range_up : pappso::AaStringCodeMassMatching::aaCodeAndMassRange
mzCellCount : pappso::ColorMapPlotConfig
mzIndexLowerBound : pappso::TimsFrame::XicComputeStructure
mzIndexUpperBound : pappso::TimsFrame::XicComputeStructure
mzListDataFormatRegExp : pappso::Utils
mzRange : pappso::XicCoord